The main idea was to replace the original board with one with more functions. The arduino reads the analog sticks from the controller, and generates a PPM signal that is sended to the frsky 2.4Ghz module that original comes with the radio.
On the first version ( http://patolin.com/blog/2013/05/05/transmisor-de-2-4ghz-con-arduino/ ) I was using a simple GUI with a 16x2 LCD, and works great. Right now Im working with a nokia 5100 LCD, that shows more information on screen