After the initial review on r/PCB and going through a few iterations, the following design has been sent to production:

Schematic:

XRE_LeggedRobot_HW/amulet_controller/Schematic/amulet_controller.pdf at master · EPFLXplore/XRE_LeggedRobot_HW (github.com)

Fabrication document:

XRE_LeggedRobot_HW/amulet_controller/Manufacturing/Assembly/amulet_controller_assembly.pdf at master · EPFLXplore/XRE_LeggedRobot_HW (github.com)

As always, the changes are described in the Revision History section (last page) of the schematic.